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get_hpa_palettes() returns a list of color palettes used by the Human Protein Atlas (HPA) project.

Usage

get_hpa_palettes()

Value

List of HPA color palettes.

Examples

get_hpa_palettes()
#> $sex
#>      F      M 
#>  "red" "blue" 
#> 
#> $sex_hpa
#>         F         M 
#> "#8a72be" "#A9D0EF" 
#> 
#> $diff_exp
#>  not significant significant down   significant up 
#>           "grey"           "blue"            "red" 
#> 
#> $cancers12
#>       AML       CLL     LYMPH      MYEL       CRC     LUNGC     GLIOM       BRC 
#> "#A6CEE3" "#2271B5" "#08585A" "#66C2A5" "#B89B74" "#ADC74F" "#FFD321" "#E8A29A" 
#>       CVX      ENDC       OVC       PRC 
#> "#9E0142" "#B195AE" "#603479" "#E7662B" 
#> 
#> $cancers15
#>       AML       CLL     LYMPH      MYEL       CRC     LUNGC     GLIOM       BRC 
#> "#A6CEE3" "#2271B5" "#08585A" "#66C2A5" "#B89B74" "#ADC74F" "#FFD321" "#E8A29A" 
#>       CVX      ENDC       OVC       PRC      MENI    SI-NET   PIT-NET 
#> "#9E0142" "#B195AE" "#603479" "#E7662B" "#FFFF80" "#504538" "#FFFF00" 
#> 
#> $secreted
#>                      Secreted to blood                      Secreted in brain 
#>                              "#B30000"                              "#FFDD00" 
#>           Secreted to digestive system   Secreted in male reproductive system 
#>                              "#1280C4"                              "#95D4F5" 
#> Secreted in female reproductive system       Secreted to extracellular matrix 
#>                              "#F8BDD7"                              "#7F6A9C" 
#>              Secreted in other tissues            Secreted - unknown location 
#>                              "#FFD480"                              "#A1A8AA" 
#>             Intracellular and membrane                                Unknown 
#>                              "#F9A266"                               "grey80" 
#> 
#> $specificity
#>        Tissue enriched         Group enriched        Tissue enhanced 
#>              "#e41a1c"              "#FF9D00"              "#984ea3" 
#> Low tissue specificity          not detected  
#>               "grey40"                 "grey" 
#> 
#> $class
#>        Healthy Cardiovascular      Metabolic         Cancer    Psychiatric 
#>      "#B3B3B3"      "#FC8D62"      "#E5C494"      "#8DA0CB"      "#66C2A5" 
#>     Autoimmune      Infection      Pediatric 
#>      "#E78AC3"      "#FFD92F"      "#A6D854" 
#>