A data subset from synthetic cancer metadata. DAid, Age, BMI, and Cohort have
been added as extra columns. The original dataset was processed with the
process_example_metadata script.
Format
A tibble with 586 rows and 9 columns:
- DAid
The Disease Atlas sample ID
- Sample
The Sample ID
- Disease
The cancer type
- Stage
The cancer stage
- Grade
The cancer grade
- Sex
The patient sex
- Age
The patient age
- BMI
The patient BMI
- Cohort
The cohort the patient belongs to
Source
https://github.com/buenoalvezm/Pan-cancer-profiling/blob/main/data/cancer_metadata_synthetic.rds
Examples
example_metadata
#> # A tibble: 586 × 9
#> DAid Sample Disease Stage Grade Sex Age BMI Cohort
#> <chr> <chr> <chr> <chr> <chr> <chr> <dbl> <dbl> <chr>
#> 1 DA00001 AML_syn_1 AML 2 NA F 42 22.7 UCAN
#> 2 DA00002 AML_syn_2 AML Unknown NA M 69 33.1 UCAN
#> 3 DA00003 AML_syn_3 AML 2 NA F 61 26.2 UCAN
#> 4 DA00004 AML_syn_4 AML Unknown NA M 54 28.1 UCAN
#> 5 DA00005 AML_syn_5 AML 2 NA F 57 21.4 UCAN
#> 6 DA00006 AML_syn_6 AML Unknown NA M 86 33.9 UCAN
#> 7 DA00007 AML_syn_7 AML 1 NA F 85 28.7 UCAN
#> 8 DA00008 AML_syn_8 AML 3 NA F 88 32.6 UCAN
#> 9 DA00009 AML_syn_9 AML Unknown NA M 80 26.1 UCAN
#> 10 DA00010 AML_syn_10 AML 3 NA M 48 33.8 UCAN
#> # ℹ 576 more rows